STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EME71489.1Hypothetical protein; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component. (215 aa)    
Predicted Functional Partners:
EME68003.1
COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 0.934
EME68002.1
COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 0.924
EME68739.1
COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
  
 0.877
EME70770.1
COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
 
 
 0.831
EME70771.1
COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
 
 
 0.824
EME68738.1
COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
  
 
 0.797
EME68737.1
COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
  
 
 0.786
EME68394.1
COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
  
 
 0.785
EME71487.1
Signal transduction protein; COG2199 FOG: GGDEF domain.
    
  0.640
EME69608.1
COG2853 Surface lipoprotein.
 
 
 
 0.604
Your Current Organism:
Magnetospirillum caucaseum
NCBI taxonomy Id: 1244869
Other names: DSM 28995, M. caucaseum, Magnetospirillum caucaseum Dziuba et al. 2016, Magnetospirillum sp. SO-1, VKM B-2936, strain SO-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.