STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EME71464.1COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. (202 aa)    
Predicted Functional Partners:
EME69375.1
Phenolpthiocerol synthesis polyketide synthase ppsA; COG3321 Polyketide synthase modules and related proteins.
  
 0.992
EME71463.1
Hypothetical protein; COG2183 Transcriptional accessory protein.
 
     0.883
EME71465.1
Hypothetical protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.808
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.788
EME70778.1
S-malonyltransferase; COG0331 (acyl-carrier-protein) S-malonyltransferase.
  
 0.757
EME69619.1
Hypothetical protein.
  
  
 0.756
EME72071.1
Hypothetical protein.
  
     0.754
EME72073.1
Hypothetical protein.
  
     0.744
EME69256.1
Hypothetical protein; COG0859 ADP-heptose:LPS heptosyltransferase.
  
     0.733
EME71140.1
Hypothetical protein; COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain.
 
 
   0.729
Your Current Organism:
Magnetospirillum caucaseum
NCBI taxonomy Id: 1244869
Other names: DSM 28995, M. caucaseum, Magnetospirillum caucaseum Dziuba et al. 2016, Magnetospirillum sp. SO-1, VKM B-2936, strain SO-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.