STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EME71469.1COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (830 aa)    
Predicted Functional Partners:
EME68653.1
PAS/PAC sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase.
  
 0.982
EME68824.1
PAS/PAC sensor(s)-containing diguanylate cyclase/phosphodiesterase; COG2200 FOG: EAL domain.
 
 
 0.977
EME67856.1
COG0642 Signal transduction histidine kinase.
 
 0.975
EME67859.1
Sensor protein barA; COG0642 Signal transduction histidine kinase.
 
 0.969
EME69652.1
Putative diguanylate cyclase/phosphodiesterase (GGDEF and EAL domains); COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
0.965
EME71301.1
COG0642 Signal transduction histidine kinase.
 
 0.964
EME68652.1
Response regulator protein; COG0784 FOG: CheY-like receiver.
 
 0.964
EME69546.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COG2199 FOG: GGDEF domain.
 
0.963
EME69611.1
Signal transduction histidine kinase; COG0784 FOG: CheY-like receiver.
 
 0.961
EME72002.1
COG0642 Signal transduction histidine kinase.
  
 0.958
Your Current Organism:
Magnetospirillum caucaseum
NCBI taxonomy Id: 1244869
Other names: DSM 28995, M. caucaseum, Magnetospirillum caucaseum Dziuba et al. 2016, Magnetospirillum sp. SO-1, VKM B-2936, strain SO-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.