STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EME71163.1COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. (200 aa)    
Predicted Functional Partners:
EME70914.1
COG0526 Thiol-disulfide isomerase and thioredoxins.
 
 
 0.892
EME71894.1
COG0526 Thiol-disulfide isomerase and thioredoxins.
 
 
 0.874
cbiA-2
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
       0.813
EME68547.1
Heme/copper-type cytochrome/quinol oxidase; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.809
EME71162.1
Hypothetical protein.
       0.800
EME71891.1
COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
 
 
 0.797
ctaG
Cytochrome C oxidase assembly protein; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
 
 
 0.792
EME71884.1
COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2; overlaps another CDS with the same product name.
 
 
 0.791
EME69528.1
COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
 
 
 0.787
EME71161.1
COG0007 Uroporphyrinogen-III methylase; Belongs to the precorrin methyltransferase family.
       0.778
Your Current Organism:
Magnetospirillum caucaseum
NCBI taxonomy Id: 1244869
Other names: DSM 28995, M. caucaseum, Magnetospirillum caucaseum Dziuba et al. 2016, Magnetospirillum sp. SO-1, VKM B-2936, strain SO-1
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