STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EME70414.1Chromosome partitioning protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family. (314 aa)    
Predicted Functional Partners:
EME70415.1
COG1192 ATPases involved in chromosome partitioning.
 
 
 0.975
EME69362.1
COG1192 ATPases involved in chromosome partitioning.
 
 
 0.915
EME69508.1
COG1192 ATPases involved in chromosome partitioning.
 
 
 0.914
gidB
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.876
EME68075.1
COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
   
 0.855
EME69594.1
COG1192 ATPases involved in chromosome partitioning.
 
 
 0.840
EME71870.1
COG3827 Uncharacterized protein conserved in bacteria.
    
 
 0.766
mnmE
GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
  
 0.751
ftsZ-2
Cell division GTPase; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.703
EME70593.1
COG1192 ATPases involved in chromosome partitioning.
 
 
 0.688
Your Current Organism:
Magnetospirillum caucaseum
NCBI taxonomy Id: 1244869
Other names: DSM 28995, M. caucaseum, Magnetospirillum caucaseum Dziuba et al. 2016, Magnetospirillum sp. SO-1, VKM B-2936, strain SO-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.