STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EME70415.1COG1192 ATPases involved in chromosome partitioning. (266 aa)    
Predicted Functional Partners:
EME70414.1
Chromosome partitioning protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
 
 
 0.975
gidB
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
 
  
 0.904
EME71543.1
TonB-dependent receptor plug; COG1629 Outer membrane receptor proteins, mostly Fe transport.
    
 
 0.738
EME70422.1
Methylated DNA-protein cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
 
    0.680
EME70982.1
Plasmid partitioning protein; COG1475 Predicted transcriptional regulators.
  
 
 0.652
EME70021.1
ParB domain protein nuclease; COG1475 Predicted transcriptional regulators.
  
 
 0.652
EME71016.1
Modification methylase DpnIIB; COG1475 Predicted transcriptional regulators; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.651
EME71017.1
Phage related DNA methyltransferase; COG1475 Predicted transcriptional regulators; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.651
EME69981.1
Modification methylase DpnIIB; COG1475 Predicted transcriptional regulators; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.651
EME69908.1
Modification methylase DpnIIB; COG1475 Predicted transcriptional regulators; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.651
Your Current Organism:
Magnetospirillum caucaseum
NCBI taxonomy Id: 1244869
Other names: DSM 28995, M. caucaseum, Magnetospirillum caucaseum Dziuba et al. 2016, Magnetospirillum sp. SO-1, VKM B-2936, strain SO-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.