STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EME68247.1Hypothetical protein. (146 aa)    
Predicted Functional Partners:
EME68246.1
Hypothetical protein; COG0582 Integrase; Belongs to the 'phage' integrase family.
  
     0.774
EME67938.1
Hypothetical protein; COG0582 Integrase.
  
     0.773
EME67509.1
Hypothetical protein; COG0582 Integrase.
  
     0.773
EME68838.1
COG0582 Integrase; Belongs to the 'phage' integrase family.
  
     0.770
EME67581.1
COG0582 Integrase; Belongs to the 'phage' integrase family.
  
     0.770
EME71353.1
COG0582 Integrase; Belongs to the 'phage' integrase family.
  
     0.769
EME68361.1
COG0582 Integrase.
  
     0.763
EME67934.1
COG0582 Integrase.
  
     0.757
EME72042.1
Hypothetical protein; COG0582 Integrase; Belongs to the 'phage' integrase family.
  
     0.756
EME67578.1
Hypothetical protein; COG0582 Integrase.
  
     0.753
Your Current Organism:
Magnetospirillum caucaseum
NCBI taxonomy Id: 1244869
Other names: DSM 28995, M. caucaseum, Magnetospirillum caucaseum Dziuba et al. 2016, Magnetospirillum sp. SO-1, VKM B-2936, strain SO-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.