STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EME67846.1COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components. (260 aa)    
Predicted Functional Partners:
znuC
ABC-type Mn/Zn transport system, ATPase component; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
 
 0.999
EME67849.1
COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin.
 
 
 0.996
fur-5
COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
 
  
 0.929
hisI
phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
       0.540
EME67845.1
Hypothetical protein.
       0.530
EME67851.1
COG0523 Putative GTPases (G3E family).
  
  
 0.482
rpmE
50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
   
  
 0.481
EME70156.1
COG4166 ABC-type oligopeptide transport system, periplasmic component.
 
  
 0.475
EME68697.1
ABC transporter ATPase; COG1137 ABC-type (unclassified) transport system, ATPase component.
     
 0.456
EME71719.1
COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.
    
 0.441
Your Current Organism:
Magnetospirillum caucaseum
NCBI taxonomy Id: 1244869
Other names: DSM 28995, M. caucaseum, Magnetospirillum caucaseum Dziuba et al. 2016, Magnetospirillum sp. SO-1, VKM B-2936, strain SO-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.