Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dapE | metN_2 | ARA02_02050 | ARA02_02045 | Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.820 |
| dapE | metP | ARA02_02050 | ARA02_02040 | Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.800 |
| dapE | metQ_2 | ARA02_02050 | ARA02_02055 | Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nlpA lipoprotein family. | 0.631 |
| dapE | metQ_3 | ARA02_02050 | ARA02_02060 | Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nlpA lipoprotein family. | 0.570 |
| mdeA | metQ_1 | ARA02_08000 | ARA02_00540 | O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.427 |
| mdeA | metQ_2 | ARA02_08000 | ARA02_02055 | O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nlpA lipoprotein family. | 0.427 |
| mdeA | metQ_3 | ARA02_08000 | ARA02_02060 | O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nlpA lipoprotein family. | 0.427 |
| metN_2 | dapE | ARA02_02045 | ARA02_02050 | Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.820 |
| metN_2 | metP | ARA02_02045 | ARA02_02040 | Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| metN_2 | metQ_1 | ARA02_02045 | ARA02_00540 | Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.991 |
| metN_2 | metQ_2 | ARA02_02045 | ARA02_02055 | Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nlpA lipoprotein family. | 0.996 |
| metN_2 | metQ_3 | ARA02_02045 | ARA02_02060 | Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nlpA lipoprotein family. | 0.995 |
| metP | dapE | ARA02_02040 | ARA02_02050 | Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.800 |
| metP | metN_2 | ARA02_02040 | ARA02_02045 | Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.999 |
| metP | metQ_1 | ARA02_02040 | ARA02_00540 | Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
| metP | metQ_2 | ARA02_02040 | ARA02_02055 | Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nlpA lipoprotein family. | 0.999 |
| metP | metQ_3 | ARA02_02040 | ARA02_02060 | Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nlpA lipoprotein family. | 0.999 |
| metQ_1 | mdeA | ARA02_00540 | ARA02_08000 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.427 |
| metQ_1 | metN_2 | ARA02_00540 | ARA02_02045 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.991 |
| metQ_1 | metP | ARA02_00540 | ARA02_02040 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
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