Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APE76190.1 | APE76388.1 | ARA02_02065 | ARA02_03170 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.681 |
| APE76386.1 | APE76387.1 | ARA02_03160 | ARA02_03165 | 6-phosphogluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. | AI-2E family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.528 |
| APE76386.1 | APE76388.1 | ARA02_03160 | ARA02_03170 | 6-phosphogluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.535 |
| APE76387.1 | APE76386.1 | ARA02_03165 | ARA02_03160 | AI-2E family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 6-phosphogluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.528 |
| APE76387.1 | APE76388.1 | ARA02_03165 | ARA02_03170 | AI-2E family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.782 |
| APE76387.1 | ftsK | ARA02_03165 | ARA02_03180 | AI-2E family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.430 |
| APE76388.1 | APE76190.1 | ARA02_03170 | ARA02_02065 | RNA methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.681 |
| APE76388.1 | APE76386.1 | ARA02_03170 | ARA02_03160 | RNA methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 6-phosphogluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.535 |
| APE76388.1 | APE76387.1 | ARA02_03170 | ARA02_03165 | RNA methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | AI-2E family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.782 |
| APE76388.1 | ftsK | ARA02_03170 | ARA02_03180 | RNA methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.478 |
| APE76388.1 | rlmH | ARA02_03170 | ARA02_08710 | RNA methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.401 |
| APE76388.1 | rsmB | ARA02_03170 | ARA02_06900 | RNA methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 16S rRNA (cytosine(967)-C(5))-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.449 |
| ftsK | APE76387.1 | ARA02_03180 | ARA02_03165 | Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. | AI-2E family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.430 |
| ftsK | APE76388.1 | ARA02_03180 | ARA02_03170 | Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.478 |
| rlmH | APE76388.1 | ARA02_08710 | ARA02_03170 | 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | RNA methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.401 |
| rlmH | rsmB | ARA02_08710 | ARA02_06900 | 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 16S rRNA (cytosine(967)-C(5))-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.446 |
| rsmB | APE76388.1 | ARA02_06900 | ARA02_03170 | 16S rRNA (cytosine(967)-C(5))-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | RNA methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.449 |
| rsmB | rlmH | ARA02_06900 | ARA02_08710 | 16S rRNA (cytosine(967)-C(5))-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.446 |