Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APE76031.1 | ARA02_06950 | ARA02_01145 | ARA02_06950 | Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Restriction endonuclease subunit S; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.414 |
| APE76031.1 | tyrC | ARA02_01145 | ARA02_05570 | Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.571 |
| APE76846.1 | ARA02_06950 | ARA02_05705 | ARA02_06950 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Restriction endonuclease subunit S; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.505 |
| APE76973.1 | ARA02_06950 | ARA02_06400 | ARA02_06950 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Restriction endonuclease subunit S; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.484 |
| ARA02_06950 | APE76031.1 | ARA02_06950 | ARA02_01145 | Restriction endonuclease subunit S; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.414 |
| ARA02_06950 | APE76846.1 | ARA02_06950 | ARA02_05705 | Restriction endonuclease subunit S; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.505 |
| ARA02_06950 | APE76973.1 | ARA02_06950 | ARA02_06400 | Restriction endonuclease subunit S; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.484 |
| ARA02_06950 | guaA | ARA02_06950 | ARA02_03120 | Restriction endonuclease subunit S; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.430 |
| ARA02_06950 | polA | ARA02_06950 | ARA02_03435 | Restriction endonuclease subunit S; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.406 |
| ARA02_06950 | topA | ARA02_06950 | ARA02_03595 | Restriction endonuclease subunit S; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.462 |
| ARA02_06950 | tyrC | ARA02_06950 | ARA02_05570 | Restriction endonuclease subunit S; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.425 |
| ARA02_06950 | whiA | ARA02_06950 | ARA02_01880 | Restriction endonuclease subunit S; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding protein WhiA; Involved in cell division and chromosome segregation. | 0.400 |
| guaA | ARA02_06950 | ARA02_03120 | ARA02_06950 | Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP. | Restriction endonuclease subunit S; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.430 |
| guaA | polA | ARA02_03120 | ARA02_03435 | Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.715 |
| guaA | topA | ARA02_03120 | ARA02_03595 | Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.583 |
| polA | ARA02_06950 | ARA02_03435 | ARA02_06950 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | Restriction endonuclease subunit S; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.406 |
| polA | guaA | ARA02_03435 | ARA02_03120 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.715 |
| polA | topA | ARA02_03435 | ARA02_03595 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.840 |
| topA | ARA02_06950 | ARA02_03595 | ARA02_06950 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | Restriction endonuclease subunit S; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.462 |
| topA | guaA | ARA02_03595 | ARA02_03120 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.583 |
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