Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
S58_04950 | S58_05600 | S58_04950 | S58_05600 | Chemotaxis protein methyltransferase. | Putative methyl-accepting chemotaxis receptor/sensory transducer. | 0.946 |
S58_04950 | S58_17090 | S58_04950 | S58_17090 | Chemotaxis protein methyltransferase. | Chemotaxis protein methyltransferase. | 0.901 |
S58_04950 | S58_29100 | S58_04950 | S58_29100 | Chemotaxis protein methyltransferase. | CheB methylesterase. | 0.932 |
S58_04950 | S58_29140 | S58_04950 | S58_29140 | Chemotaxis protein methyltransferase. | Putative chemotaxis protein methyltransferase. | 0.975 |
S58_04950 | cheA | S58_04950 | S58_04920 | Chemotaxis protein methyltransferase. | Chemotaxis protein CheA. | 0.982 |
S58_04950 | cheA-2 | S58_04950 | S58_17050 | Chemotaxis protein methyltransferase. | Chemotaxis protein CheA. | 0.963 |
S58_04950 | cheB | S58_04950 | S58_17080 | Chemotaxis protein methyltransferase. | Chemotaxis response regulator protein CheB-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.972 |
S58_04950 | cheW | S58_04950 | S58_04930 | Chemotaxis protein methyltransferase. | Chemotaxis protein CheW. | 0.974 |
S58_04950 | cheW-2 | S58_04950 | S58_17060 | Chemotaxis protein methyltransferase. | Chemotaxis protein CheW. | 0.941 |
S58_04950 | cheY-2 | S58_04950 | S58_17070 | Chemotaxis protein methyltransferase. | Chemotaxis protein CheY. | 0.664 |
S58_05600 | S58_04950 | S58_05600 | S58_04950 | Putative methyl-accepting chemotaxis receptor/sensory transducer. | Chemotaxis protein methyltransferase. | 0.946 |
S58_05600 | S58_17090 | S58_05600 | S58_17090 | Putative methyl-accepting chemotaxis receptor/sensory transducer. | Chemotaxis protein methyltransferase. | 0.946 |
S58_05600 | S58_29100 | S58_05600 | S58_29100 | Putative methyl-accepting chemotaxis receptor/sensory transducer. | CheB methylesterase. | 0.925 |
S58_05600 | S58_29140 | S58_05600 | S58_29140 | Putative methyl-accepting chemotaxis receptor/sensory transducer. | Putative chemotaxis protein methyltransferase. | 0.940 |
S58_05600 | cheA | S58_05600 | S58_04920 | Putative methyl-accepting chemotaxis receptor/sensory transducer. | Chemotaxis protein CheA. | 0.991 |
S58_05600 | cheA-2 | S58_05600 | S58_17050 | Putative methyl-accepting chemotaxis receptor/sensory transducer. | Chemotaxis protein CheA. | 0.991 |
S58_05600 | cheB | S58_05600 | S58_17080 | Putative methyl-accepting chemotaxis receptor/sensory transducer. | Chemotaxis response regulator protein CheB-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.947 |
S58_05600 | cheW | S58_05600 | S58_04930 | Putative methyl-accepting chemotaxis receptor/sensory transducer. | Chemotaxis protein CheW. | 0.965 |
S58_05600 | cheW-2 | S58_05600 | S58_17060 | Putative methyl-accepting chemotaxis receptor/sensory transducer. | Chemotaxis protein CheW. | 0.965 |
S58_05600 | cheY-2 | S58_05600 | S58_17070 | Putative methyl-accepting chemotaxis receptor/sensory transducer. | Chemotaxis protein CheY. | 0.863 |
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