Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
S58_10950 | S58_31470 | Conserved exported hypothetical protein. | Toxin secretion ABC transporter ATP-binding and membrane protein. | 0.863 |
S58_10950 | S58_31480 | Conserved exported hypothetical protein. | Putative HlyD family secretion protein. | 0.797 |
S58_10950 | S58_39990 | Conserved exported hypothetical protein. | Putative secretion protein, HlyD family. | 0.591 |
S58_10950 | S58_41120 | Conserved exported hypothetical protein. | Putative secretion HlyD family protein. | 0.632 |
S58_10950 | S58_43520 | Conserved exported hypothetical protein. | Putative calcium binding hemolysin protein. | 0.530 |
S58_10950 | S58_43530 | Conserved exported hypothetical protein. | Putative HlyD family secretion protein. | 0.797 |
S58_10950 | S58_46080 | Conserved exported hypothetical protein. | Putative type I secretion membrane fusion protein, HlyD precursor. | 0.626 |
S58_10950 | S58_48550 | Conserved exported hypothetical protein. | Putative HlyD family secretion protein. | 0.797 |
S58_10950 | S58_60080 | Conserved exported hypothetical protein. | Putative calcium binding hemolysin protein. | 0.530 |
S58_10950 | S58_60120 | Conserved exported hypothetical protein. | Putative HlyD family secretion protein. | 0.797 |
S58_31470 | S58_10950 | Toxin secretion ABC transporter ATP-binding and membrane protein. | Conserved exported hypothetical protein. | 0.863 |
S58_31470 | S58_31480 | Toxin secretion ABC transporter ATP-binding and membrane protein. | Putative HlyD family secretion protein. | 0.971 |
S58_31470 | S58_39990 | Toxin secretion ABC transporter ATP-binding and membrane protein. | Putative secretion protein, HlyD family. | 0.694 |
S58_31470 | S58_41120 | Toxin secretion ABC transporter ATP-binding and membrane protein. | Putative secretion HlyD family protein. | 0.709 |
S58_31470 | S58_43520 | Toxin secretion ABC transporter ATP-binding and membrane protein. | Putative calcium binding hemolysin protein. | 0.793 |
S58_31470 | S58_43530 | Toxin secretion ABC transporter ATP-binding and membrane protein. | Putative HlyD family secretion protein. | 0.879 |
S58_31470 | S58_46080 | Toxin secretion ABC transporter ATP-binding and membrane protein. | Putative type I secretion membrane fusion protein, HlyD precursor. | 0.770 |
S58_31470 | S58_48550 | Toxin secretion ABC transporter ATP-binding and membrane protein. | Putative HlyD family secretion protein. | 0.878 |
S58_31470 | S58_60080 | Toxin secretion ABC transporter ATP-binding and membrane protein. | Putative calcium binding hemolysin protein. | 0.793 |
S58_31470 | S58_60120 | Toxin secretion ABC transporter ATP-binding and membrane protein. | Putative HlyD family secretion protein. | 0.879 |
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