STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S58_31710Conserved hypothetical protein. (293 aa)    
Predicted Functional Partners:
tolR
TolR protein.
  
 
 0.666
S58_30240
Biopolymer transport protein ExbD.
  
 
 0.666
S58_56430
Uptake of enterobactin.
  
 
 0.666
S58_64720
Biopolymer transport ExbD protein.
  
 
 0.666
S58_65270
Putative biopolymer transport protein, ExbD/TolR family.
  
 
 0.663
S58_65280
Putative transport protein ExbB2.
  
 
 0.644
S58_19360
Iron transport outer membrane receptor.
  
 
 0.631
S58_20890
TonB-dependent siderophore receptor.
  
 
 0.631
S58_34360
TonB-dependent receptor protein.
  
 
 0.631
S58_64680
TonB-dependent receptor protein.
  
 
 0.631
Your Current Organism:
Bradyrhizobium oligotrophicum
NCBI taxonomy Id: 1245469
Other names: Agromonas oligotrophica LMG 10732, Agromonas oligotrophica S58, B. oligotrophicum S58, Bradyrhizobium oligotrophicum S58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.