STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S58_46730Conserved hypothetical protein. (176 aa)    
Predicted Functional Partners:
S58_03680
Putative carbonic anhydrase 2; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 
 0.823
S58_58780
Ribulose bisphosphate carboxylase small chain, RuBisCO small subunit.
   
 
 0.768
cbbL
Ribulose bisphosphate carboxylase large chain, RuBisCO large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
    
 
 0.736
S58_67690
Uncharacterized ribulose bisphosphate carboxylase-like protein; Belongs to the RuBisCO large chain family.
    
 
 0.736
S58_46740
Conserved membrane hypothetical protein.
       0.613
S58_46750
Conserved exported hypothetical protein.
       0.455
paaX
Phenylacetic acid degradation operon negative regulatory protein PaaX.
  
  
 0.455
S58_32400
Dihydroorotase.
  
  
 0.451
S58_17220
D-hydantoinase.
  
  
 0.445
S58_54820
Dihydroorotase.
  
  
 0.445
Your Current Organism:
Bradyrhizobium oligotrophicum
NCBI taxonomy Id: 1245469
Other names: Agromonas oligotrophica LMG 10732, Agromonas oligotrophica S58, B. oligotrophicum S58, Bradyrhizobium oligotrophicum S58
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.