STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S58_47620High-affinity branched-chain amino acid ABC transporter substrate-binding protein. (394 aa)    
Predicted Functional Partners:
S58_47590
High-affinity branched-chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.992
S58_47580
High-affinity branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.990
S58_47600
High-affinity branched-chain amino acid ABC transporter ATP-binding protein.
 
  
 0.895
S58_47610
High-affinity branched-chain amino acid ABC transporter ATP-binding protein.
 
  
 0.892
S58_20120
Putative branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.768
S58_66510
High-affinity branched-chain amino acid transport protein, ABC superfamily, ATP-binding.
 
  
 0.766
S58_38850
Branched-chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.757
S58_66530
Putative high-affinity branched-chain amino acid transport system permease protein LivM, ABC superfamily, membrane; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.751
S58_09420
ABC branched chain amino acid family transporter, fused inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.748
S58_38860
Branched chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.748
Your Current Organism:
Bradyrhizobium oligotrophicum
NCBI taxonomy Id: 1245469
Other names: Agromonas oligotrophica LMG 10732, Agromonas oligotrophica S58, B. oligotrophicum S58, Bradyrhizobium oligotrophicum S58
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