STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN46887.1Peptidase M23 family protein. (273 aa)    
Predicted Functional Partners:
nlpD
Lipoprotein NlpD.
 
  
 0.838
xseA
Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
       0.806
BAN51082.1
Peptidase M23 family protein.
 
   
 0.792
BAN46886.1
Hypothetical protein.
 
     0.661
BAN50917.1
N-acetylmuramoyl-L-alanine amidase.
 
  
 0.614
BAN46889.1
Hypothetical protein.
       0.608
znuA
Zinc ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.577
ftsX
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.553
rlpA
Putative lipoprotein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
 
 
 0.523
lepB-2
Signal peptidase I; Belongs to the peptidase S26 family.
 
  
 0.521
Your Current Organism:
Pseudomonas resinovorans NBRC106553
NCBI taxonomy Id: 1245471
Other names: P. resinovorans NBRC 106553, Pseudomonas resinovorans NBRC 106553
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.