STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000341265_01084Unannotated protein. (315 aa)    
Predicted Functional Partners:
GCA_000341265_01085
Unannotated protein.
 
  
 0.977
GCA_000341265_03867
Unannotated protein.
 
 0.950
GCA_000341265_01086
Unannotated protein.
 
 
 0.869
GCA_000341265_01087
Unannotated protein.
 
 
  0.766
GCA_000341265_01503
Unannotated protein.
   
 
  0.679
GCA_000341265_03923
Unannotated protein.
   
 
  0.679
GCA_000341265_03295
Unannotated protein.
    
  0.537
GCA_000341265_03942
Unannotated protein.
    
  0.537
GCA_000341265_04196
Unannotated protein.
    
  0.537
GCA_000341265_02968
Unannotated protein.
    
 0.530
Your Current Organism:
Nocardiopsis prasina
NCBI taxonomy Id: 1245475
Other names: N. prasina DSM 43845, Nocardiopsis prasina ATCC 35940, Nocardiopsis prasina DSM 43845
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.