STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT93917.1Cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. (740 aa)    
Predicted Functional Partners:
SDT93936.1
Cellulose synthase (UDP-forming); Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.
 
 0.996
SDT94074.1
Cellulose synthase (UDP-forming); Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.
 
 0.993
SDU31034.1
Sel1 repeat-containing protein.
  
 0.979
SDT93953.1
Cellulose synthase operon protein YhjQ.
 
     0.952
htpG
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
   
 0.952
SDT93997.1
Cellulose synthase operon protein YhjU.
 
   
 0.946
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.944
SDT93899.1
Tetratricopeptide repeat-containing protein.
 
     0.914
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.914
SDT94038.1
Cellulase family 8.
 
  
 0.899
Your Current Organism:
Pseudomonas guangdongensis
NCBI taxonomy Id: 1245526
Other names: CCTCC AB 2012022, KACC 16606, P. guangdongensis, Pseudomonas guangdongensis Yang et al. 2013, Pseudomonas sp. SgZ-6, strain SgZ-6
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