STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDV55_107225Structural maintenance of chromosomes protein. (1260 aa)    
Predicted Functional Partners:
CFD26_101783
Uncharacterized protein.
   
 0.994
CFD26_106501
SMC hinge domain-containing protein.
  
0.992
CDV55_104127
SCD domain-containing protein.
   
 0.991
CFD26_104125
Rad21_Rec8_N domain-containing protein.
   
 0.980
CFD26_107724
Sister chromatid cohesion protein.
   
 0.971
CDV55_107264
Uncharacterized protein.
   
 0.970
CFD26_100820
Serine/threonine-protein kinase.
   
 0.955
CDV55_107898
Uncharacterized protein.
   
 0.938
CFD26_106854
UmuC domain-containing protein.
   
 0.938
CFD26_107102
Peptidase C50 domain-containing protein.
   
 0.934
Your Current Organism:
Aspergillus turcosus
NCBI taxonomy Id: 1245748
Other names: A. turcosus, Aspergillus sp. IBT 27921, Aspergillus sp. KACC 41955, Aspergillus sp. KACC 42090, Aspergillus turcosus S.B. Hong, Frisvad and Samson 2008, IBT 27921, KACC 42091
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.