STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFD26_104120Uncharacterized protein. (745 aa)    
Predicted Functional Partners:
CFD26_108130
PHD domain-containing protein.
   
 0.998
CDV55_105568
DUF3591 domain-containing protein.
    
 0.997
CDV55_101092
Uncharacterized protein.
    
 0.997
CDV55_102852
DUF4211 domain-containing protein.
    
 0.997
CDV55_103205
Uncharacterized protein.
    
 0.997
CDV55_101560
Uncharacterized protein.
    
 0.997
CDV55_106145
TAFII55_N domain-containing protein.
    
 0.997
CDV55_107181
TFIID_20kDa domain-containing protein.
   
 0.997
CDV55_108338
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.997
CFD26_100048
TAFII28 domain-containing protein.
    
 0.997
Your Current Organism:
Aspergillus turcosus
NCBI taxonomy Id: 1245748
Other names: A. turcosus, Aspergillus sp. IBT 27921, Aspergillus sp. KACC 41955, Aspergillus sp. KACC 42090, Aspergillus turcosus S.B. Hong, Frisvad and Samson 2008, IBT 27921, KACC 42091
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.