STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000340965_00136Unannotated protein. (370 aa)    
Predicted Functional Partners:
GCA_000340965_02374
Unannotated protein.
 
 
 0.965
GCA_000340965_02840
Unannotated protein.
    
 0.964
GCA_000340965_00134
Unannotated protein.
 
 
 0.962
GCA_000340965_01897
Unannotated protein.
  
  
 
0.936
GCA_000340965_02241
Unannotated protein.
  
  
 
0.934
GCA_000340965_02004
Unannotated protein.
 
 
  0.915
GCA_000340965_00135
Unannotated protein.
      0.834
GCA_000340965_02422
Unannotated protein.
 
  
 0.775
GCA_000340965_03268
Unannotated protein.
  
  
 
0.760
GCA_000340965_01353
Unannotated protein.
   
 0.744
Your Current Organism:
Nocardiopsis kunsanensis
NCBI taxonomy Id: 1246445
Other names: N. kunsanensis DSM 44524, Nocardiopsis kunsanensis DSM 44524
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.