STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000340965_00806Unannotated protein. (250 aa)    
Predicted Functional Partners:
GCA_000340965_00920
Unannotated protein.
  
   0.967
GCA_000340965_00805
Unannotated protein.
       0.773
GCA_000340965_00919
Unannotated protein.
  
     0.668
GCA_000340965_02548
Unannotated protein.
  
 
 0.628
GCA_000340965_04494
Unannotated protein.
  
 
 0.628
GCA_000340965_04495
Unannotated protein.
  
 
  0.577
GCA_000340965_00803
Unannotated protein.
       0.576
GCA_000340965_00804
Unannotated protein.
       0.576
GCA_000340965_01369
Unannotated protein.
    
  0.454
GCA_000340965_00802
Unannotated protein.
       0.435
Your Current Organism:
Nocardiopsis kunsanensis
NCBI taxonomy Id: 1246445
Other names: N. kunsanensis DSM 44524, Nocardiopsis kunsanensis DSM 44524
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.