STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000341025_00634Unannotated protein. (230 aa)    
Predicted Functional Partners:
GCA_000341025_00657
Unannotated protein.
  
 
   0.756
GCA_000341025_03919
Unannotated protein.
 
     0.744
GCA_000341025_03512
Unannotated protein.
  
     0.739
GCA_000341025_00924
Unannotated protein.
 
     0.737
GCA_000341025_03527
Unannotated protein.
  
     0.728
GCA_000341025_00524
Unannotated protein.
  
     0.722
GCA_000341025_03952
Unannotated protein.
  
     0.719
GCA_000341025_00668
Unannotated protein.
  
     0.717
GCA_000341025_00908
Unannotated protein.
  
     0.715
GCA_000341025_01942
Unannotated protein.
  
     0.715
Your Current Organism:
Nocardiopsis salina
NCBI taxonomy Id: 1246485
Other names: N. salina YIM 90010, Nocardiopsis salina YIM 90010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.