STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000341025_01237Unannotated protein. (484 aa)    
Predicted Functional Partners:
GCA_000341025_01240
Unannotated protein.
  
 0.954
GCA_000341025_00686
Unannotated protein.
 
  
 0.791
GCA_000341025_02196
Unannotated protein.
      
 0.727
GCA_000341025_03905
Unannotated protein.
    
   0.711
GCA_000341025_01241
Unannotated protein.
 
   
 0.703
GCA_000341025_00793
Unannotated protein.
 
  
 0.689
GCA_000341025_01246
Unannotated protein.
 
   
 0.665
GCA_000341025_01280
Unannotated protein.
 
   
 0.645
GCA_000341025_01422
Unannotated protein.
  
  
 0.645
GCA_000341025_01233
Unannotated protein.
     
 0.638
Your Current Organism:
Nocardiopsis salina
NCBI taxonomy Id: 1246485
Other names: N. salina YIM 90010, Nocardiopsis salina YIM 90010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.