STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSACC_03389RNase H domain-containing protein. (188 aa)    
Predicted Functional Partners:
PSACC_01682
DNA-directed DNA polymerase, family A, palm domain-containing protein.
    
 0.919
PSACC_03393
Putative dihydrofolate reductase.
    
 0.907
PSACC_01360
Putative thymidylate synthase.
    
 0.907
PSACC_00431
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the PdxS/SNZ family.
    
 0.886
PSACC_02017
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.851
PSACC_01876
Thymidylate_kin domain-containing protein.
  
 
 0.837
PSACC_02718
Nucleoside diphosphate kinase.
     
 0.822
PSACC_00772
Nucleoside diphosphate kinase; Belongs to the NDK family.
     
 0.822
PSACC_01478
annotation not available
  
 
 0.813
PSACC_03507
Uncharacterized protein.
    
  0.804
Your Current Organism:
Paramicrosporidium saccamoebae
NCBI taxonomy Id: 1246581
Other names: KSL3, P. saccamoebae, Paramicrosporidium saccamoebae Corsaro et al., 2014, fungal sp. KSL3
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