STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSACC_03206Uncharacterized protein. (228 aa)    
Predicted Functional Partners:
PSACC_02875
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
    
 0.999
PSACC_03204
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.879
PSACC_01952
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.879
PSACC_02243
Squalene synthetase.
     
 0.842
PSACC_01284
Solanesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.828
PSACC_00260
Ras-like protein.
    
 0.686
PSACC_02824
Phytoene/squalene synthetase.
     
 0.684
PSACC_00382
Peptidase_M48 domain-containing protein.
     
 0.624
PSACC_00383
Peptidase_M48 domain-containing protein.
     
 0.624
PSACC_00414
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
     
 0.624
Your Current Organism:
Paramicrosporidium saccamoebae
NCBI taxonomy Id: 1246581
Other names: KSL3, P. saccamoebae, Paramicrosporidium saccamoebae Corsaro et al., 2014, fungal sp. KSL3
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