STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSACC_02572SAP domain-containing ribonucleoprotein. (153 aa)    
Predicted Functional Partners:
PSACC_02484
Aly/REF export factor 2.
   
 0.999
PSACC_00036
ATP-dependent RNA helicase uap56.
   
 0.977
PSACC_01456
Uncharacterized protein.
    
 0.890
PSACC_02740
Uncharacterized protein.
   
 0.819
PSACC_01282
Uncharacterized protein.
    
 0.803
PSACC_02300
WD_REPEATS_REGION domain-containing protein; Belongs to the cyclin family.
     
 0.785
PSACC_01774
Protein mago nashi.
   
 0.730
PSACC_03721
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.727
PSACC_01906
Mrd1p.
   
 0.686
PSACC_03304
RRM domain-containing protein.
   
 0.647
Your Current Organism:
Paramicrosporidium saccamoebae
NCBI taxonomy Id: 1246581
Other names: KSL3, P. saccamoebae, Paramicrosporidium saccamoebae Corsaro et al., 2014, fungal sp. KSL3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.