STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSACC_02065Nuclear pore glycoprotein p62. (726 aa)    
Predicted Functional Partners:
PSACC_01185
Nup54 domain-containing protein.
   
 0.999
PSACC_00764
Nuclear pore protein.
   
 0.995
PSACC_01403
Uncharacterized protein.
   
 0.983
PSACC_02205
Uncharacterized protein.
   
 0.981
PSACC_00621
SEC13-like protein; Belongs to the WD repeat SEC13 family.
    
 0.952
PSACC_00554
Uncharacterized protein.
   
 0.946
PSACC_03184
Nucleoporin.
   
 0.937
PSACC_02758
Peptidase S59 domain-containing protein.
   
0.937
PSACC_01960
Putative nucleoporin.
   
 0.937
PSACC_01961
Nuclear pore complex, Nup155 component.
   
 0.937
Your Current Organism:
Paramicrosporidium saccamoebae
NCBI taxonomy Id: 1246581
Other names: KSL3, P. saccamoebae, Paramicrosporidium saccamoebae Corsaro et al., 2014, fungal sp. KSL3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.