STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSACC_01653DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1144 aa)    
Predicted Functional Partners:
PSACC_03365
SMP-LTD domain-containing protein.
   
 0.999
PSACC_02984
RPOLD domain-containing protein.
  
 0.999
PSACC_02826
RNA polymerase I associated factor, A49-like domain-containing protein.
   
 0.999
PSACC_01947
DNA-directed RNA polymerase subunit; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.999
PSACC_01754
Uncharacterized protein.
  
 0.999
PSACC_01602
Subunit common to RNA polymerases I, II, and.
  
 0.999
PSACC_00642
RPA43_OB domain-containing protein.
   
 0.999
PSACC_00228
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
 0.999
PSACC_03526
RNA polymerase I transcription initiation factor RRN3 domain-containing protein.
   
 0.998
T1D943
DNA-directed RNA polymerases I and III subunit RPAC2-like protein.
   
 0.995
Your Current Organism:
Paramicrosporidium saccamoebae
NCBI taxonomy Id: 1246581
Other names: KSL3, P. saccamoebae, Paramicrosporidium saccamoebae Corsaro et al., 2014, fungal sp. KSL3
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