STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSACC_01690Adenosine deaminase editase. (321 aa)    
Predicted Functional Partners:
PSACC_00647
SUMO-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.766
PSACC_00521
CMP/dCMP-type deaminase domain-containing protein.
      
 0.635
PSACC_01228
CMP/dCMP-type deaminase domain-containing protein.
      
 0.615
PSACC_03577
tRNA (Guanine-N(7)-)-methyltransferase non-catalytic subunit.
      
 0.480
TRM5
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.
      
 0.470
PSACC_01450
SAM-dependent MTase TRM10-type domain-containing protein.
      
 0.442
PSACC_00742
Uncharacterized protein.
    
 0.438
PSACC_02676
Putative asparagine synthase.
   
  
 0.432
PSACC_01761
Trna guanosine-2-o-methyltransferase.
      
 0.432
PSACC_02734
Thioredoxin.
    
   0.407
Your Current Organism:
Paramicrosporidium saccamoebae
NCBI taxonomy Id: 1246581
Other names: KSL3, P. saccamoebae, Paramicrosporidium saccamoebae Corsaro et al., 2014, fungal sp. KSL3
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