STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSACC_01598zf-C2HC5 domain-containing protein. (167 aa)    
Predicted Functional Partners:
PSACC_00855
Uncharacterized protein.
    
 
 0.908
PSACC_01251
Hydrolase, alpha/beta hydrolase fold family.
    
   0.823
PSACC_00477
Uncharacterized protein.
    
   0.823
PSACC_00276
Ribosomal_L6 domain-containing protein; Belongs to the universal ribosomal protein uL6 family.
    
   0.685
PSACC_02423
Uncharacterized protein; Belongs to the complex I 20 kDa subunit family.
    
 
 0.646
PSACC_03033
AKAP7_NLS domain-containing protein.
    
 
 0.638
PSACC_01790
Uncharacterized protein.
    
 
 0.505
PSACC_03597
bVLRF1 domain-containing protein.
      
 0.453
PSACC_01093
RxLR-like protein.
    
   0.450
PSACC_00035
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.450
Your Current Organism:
Paramicrosporidium saccamoebae
NCBI taxonomy Id: 1246581
Other names: KSL3, P. saccamoebae, Paramicrosporidium saccamoebae Corsaro et al., 2014, fungal sp. KSL3
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