STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSACC_00782GATA-type domain-containing protein. (683 aa)    
Predicted Functional Partners:
PSACC_01506
Uncharacterized protein.
   
 0.999
PSACC_00600
Pre-mRNA-splicing factor prp5.
   
 0.999
PSACC_03576
Hsp71-like protein; Belongs to the heat shock protein 70 family.
    
 0.876
PSACC_03011
Uncharacterized protein.
   
 
 0.864
PSACC_03442
Uncharacterized protein.
   
 
 0.855
PSACC_02516
SKIP_SNW domain-containing protein.
   
 
 0.848
PSACC_01417
Uncharacterized protein.
   
 
 0.796
PSACC_01558
RRM domain-containing protein.
    
   0.761
PSACC_02619
Pre-mRNA-splicing factor 38 domain-containing protein.
   
  0.717
PSACC_03254
Zinc finger matrin-type protein 2.
   
  0.708
Your Current Organism:
Paramicrosporidium saccamoebae
NCBI taxonomy Id: 1246581
Other names: KSL3, P. saccamoebae, Paramicrosporidium saccamoebae Corsaro et al., 2014, fungal sp. KSL3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.