STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSACC_00740Putative mage family protein. (231 aa)    
Predicted Functional Partners:
PSACC_03139
Smc5 DNA repair.
   
 0.999
PSACC_02381
Rad18 post replication repair.
   
 0.999
PSACC_01412
SUMO ligase MMS21.
    
 0.999
PSACC_00911
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.999
PSACC_03430
Smc3 sister chromatid cohesion and recombination during meiosis.
    
 0.757
PSACC_01788
Structural maintenance of chromosomes protein.
   
 0.733
PSACC_02165
Smc4 subunit of chromosomal cohesion complex.
    
 0.703
PSACC_02282
Smc2 sister chromatid cohesion.
    
 0.696
PSACC_01451
Small ubiquitin-related modifier.
   
 0.633
PSACC_00647
SUMO-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.630
Your Current Organism:
Paramicrosporidium saccamoebae
NCBI taxonomy Id: 1246581
Other names: KSL3, P. saccamoebae, Paramicrosporidium saccamoebae Corsaro et al., 2014, fungal sp. KSL3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.