STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSACC_00137Uncharacterized protein. (1453 aa)    
Predicted Functional Partners:
PSACC_03390
Bromodomain and WD repeat-containing protein 1.
   
 0.999
PSACC_01128
Uncharacterized protein.
   
 0.998
PSACC_00579
Swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily d member 1-like.
   
 0.997
PSACC_02825
Uncharacterized protein; Belongs to the actin family.
    
 0.988
PSACC_03360
Actin-A3b, cytoplasmic; Belongs to the actin family.
   
 0.972
PSACC_03328
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.941
PSACC_03329
Histone H3; Belongs to the histone H3 family.
    
 0.915
PSACC_01786
Histone H3; Belongs to the histone H3 family.
    
 0.915
PSACC_00155
Histone H2A; Belongs to the histone H2A family.
    
 0.857
PSACC_00035
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.850
Your Current Organism:
Paramicrosporidium saccamoebae
NCBI taxonomy Id: 1246581
Other names: KSL3, P. saccamoebae, Paramicrosporidium saccamoebae Corsaro et al., 2014, fungal sp. KSL3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.