STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (530 aa)    
Predicted Functional Partners:
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
 
 
 0.999
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.926
porA
PorA2.
  
 
 0.838
acs
acetyl-CoA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 
 0.834
SLM32119.1
Acetyl-CoA hydrolase/transferase family protein.
  
 
 0.789
acsM-2
AcsM1.
   
 
 0.775
pflD
PflD2.
  
 
 0.774
SLM27707.1
GCN5-related N-acetyltransferase.
    
 0.771
acsA2
Acetyl-coenzyme A synthetase; Function of homologous gene experimentally demonstrated in an other organism; putative enzyme.
   
 
 0.765
SLM30266.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.721
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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