STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLM27486.1Exported hypothetical protein; No homology to any previously reported sequences. (357 aa)    
Predicted Functional Partners:
SLM27487.1
Putative Peptidase C14 caspase catalytic subunit p20; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.696
SLM30780.1
ATPase, AAA family.
   
 0.684
SLM30864.1
ATPase, AAA family.
   
 0.684
SLM30925.1
ATPase, AAA family.
   
 0.684
flgC
FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.641
SLM27488.1
Hypothetical protein; No homology to any previously reported sequences.
 
  
 0.627
SLM32244.1
Hypothetical protein; No homology to any previously reported sequences.
  
 0.551
SLM28351.1
Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 0.549
SLM29968.1
Hypothetical protein; No homology to any previously reported sequences.
  
 0.548
SLM27490.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.544
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.