STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLM27487.1Putative Peptidase C14 caspase catalytic subunit p20; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (487 aa)    
Predicted Functional Partners:
SLM27488.1
Hypothetical protein; No homology to any previously reported sequences.
 
  
 0.840
SLM27495.1
Exported hypothetical protein; No homology to any previously reported sequences.
 
     0.811
SLM27735.1
Hypothetical protein; No homology to any previously reported sequences.
 
 
 
 0.778
SLM27486.1
Exported hypothetical protein; No homology to any previously reported sequences.
 
     0.696
SLM30780.1
ATPase, AAA family.
   
 0.684
SLM30864.1
ATPase, AAA family.
   
 0.684
SLM30925.1
ATPase, AAA family.
   
 0.684
flgC
FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.641
SLM31088.1
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.567
SLM29100.1
Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.559
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.