STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yecCPutative transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (263 aa)    
Predicted Functional Partners:
SLM27497.1
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family (fragment).
 0.997
glnP
Glutamine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 0.997
SLM29647.1
ABC-type amino acid transport system, permease component.
 0.987
SLM27413.1
Polar amino acid ABC transporter, inner membrane subunit; Function of strongly homologous gene; transporter.
 0.981
aapM
Amino-acid transporter subunit; Function of strongly homologous gene; transporter.
 0.979
SLM29645.1
ABC-type amino acid transport system, permease protein.
 0.979
SLM27498.1
Cystine ABC transporter, cystine-binding protein.
 
 0.918
glnH
Glutamine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the bacterial solute-binding protein 3 family.
 0.915
SLM32548.1
Extracellular solute-binding protein family 3; Belongs to the bacterial solute-binding protein 3 family.
 
 0.900
msbA
Lipid A export ATP-binding/permease protein MsbA.
 
     
0.899
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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