STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLM27839.1Hypothetical protein; No homology to any previously reported sequences; Belongs to the 'phage' integrase family. (342 aa)    
Predicted Functional Partners:
SLM29180.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.739
SLM30766.1
Putative Integrase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the 'phage' integrase family.
  
     0.717
SLM31936.1
Integrase/recombinase (fragment).
  
     0.683
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
 0.659
nifJ
Pyruvate-flavodoxin oxidoreductase.
    
  0.648
SLM31037.1
Site-specific recombinase, phage integrase family (fragment).
  
     0.601
SLM27838.1
Exported hypothetical protein; No homology to any previously reported sequences.
       0.551
SLM30124.1
Putative ComF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
    0.520
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
   
    0.510
tyrA
T-protein (Includes: Chorismate mutase; Prephenate dehydrogenase).
  
    0.496
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.