STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLM28092.1ABC-type transporter, permease component; Belongs to the binding-protein-dependent transport system permease family. (295 aa)    
Predicted Functional Partners:
SLM28091.1
ABC-type transporter, ATP-binding protein (ATPase).
 
  0.998
SLM28093.1
ABC-type transporter, periplasmic substrate binding protein.
 
  0.996
SLM31165.1
Hypothetical protein; No homology to any previously reported sequences.
 
 
  0.929
SLM31170.1
Exported hypothetical protein; No homology to any previously reported sequences.
 
 
  0.929
SLM31391.1
ABC-type uncharacterized transport system periplasmic component-like protein (fragment).
 
 
  0.924
SLM30596.1
ABC-type uncharacterized transport system, periplasmic component.
 
 
  0.857
SLM30706.1
Exported hypothetical protein; No homology to any previously reported sequences.
 
 
  0.753
SLM30267.1
ABC-type sugar transport system, ATPase component.
 
 
  0.735
SLM28078.1
ABC-type uncharacterized transport system periplasmic component-like protein.
  
 
  0.706
SLM28079.1
ABC-type uncharacterized transport system periplasmic component-like protein.
  
 
  0.706
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.