STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amtBAmmonium transport protein (Amt family); Function of homologous gene experimentally demonstrated in an other organism; transporter. (441 aa)    
Predicted Functional Partners:
glnB-2
Regulatory protein P-II for glutamine synthetase; Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the P(II) protein family.
 0.997
glnB
Regulatory protein P-II for glutamine synthetase; Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the P(II) protein family.
 0.982
glnBB
Nitrogen fixation nifHD region glnB-like protein 2.
 
 0.977
glnBA
Nitrogen fixation nifHD region glnB-like protein 1.
  
 0.963
SLM33244.1
Nitrogen regulatory protein P-II family protein.
  
 0.962
nifK-2
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
   
  
 0.851
nifD
Nitrogenase molybdenum-iron protein alpha chain.
   
  
 0.769
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
  
  
 0.769
SLM33200.1
Putative Signal transduction histidine kinase, nitrogen specific, NtrB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.762
SLM28351.1
Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 0.753
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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