STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLM28515.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0337 (CsbD) family. (56 aa)    
Predicted Functional Partners:
SLM32362.1
Putative periplasmatic protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.858
SLM28516.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.773
SLM29958.1
ABC transporter, ATP-binding protein.
  
    0.628
SLM32366.1
PRC-barrel domain protein (fragment).
  
  
 0.604
SLM29957.1
ABC-2 type transporter.
  
    0.603
SLM30405.1
Hypothetical protein; No homology to any previously reported sequences.
   
    0.589
SLM30630.1
Periplasmic protein involved in polysaccharide export (fragment).
   
    0.589
SLM27638.1
NAD-dependent epimerase/dehydratase.
   
    0.581
SLM28594.1
NAD-dependent epimerase/dehydratase family protein.
   
    0.581
SLM30743.1
Putative YcaC-related amidohydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.514
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.