STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLM29287.1Putative Hydroxyacylglutathione hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (206 aa)    
Predicted Functional Partners:
nox
Nox1.
  
 0.867
SLM28414.1
Putative (Acyl-carrier-protein) S-malonyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.818
SLM33099.1
Putative Beta-ketoacyl synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.800
SLM29129.1
Putative Hydroxyacylglutathione hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
0.785
SLM29286.1
Anthranilate synthase; Function of strongly homologous gene; enzyme.
  
  
 0.745
SLM33114.1
Putative 6-deoxyerythronolide-B synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
 0.738
SLM32264.1
Rhodanese domain protein.
  
 0.708
SLM27709.1
Hypothetical protein; No homology to any previously reported sequences.
    
 
 0.696
gloA
Putative lactoylglutathione lyase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
 0.696
nusB
Transcription termination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
  
    0.685
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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