STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLM29327.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (308 aa)    
Predicted Functional Partners:
SLM28424.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
 
 0.999
wecB
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
 
 0.905
SLM29396.1
Xylose isomerase domain-containing protein TIM barrel.
  
 
 0.903
SLM31755.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.884
SLM32072.1
Sugar isomerase.
  
 
 0.884
SLM33016.1
Putative Xylose isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.884
degT-2
Pleiotropic regulatory protein; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.872
lysU
Lysine tRNA synthetase, inducible; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.857
rmlB
dTDP-glucose 4,6 dehydratase, NAD(P)-binding; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.838
degT
Pleiotropic regulatory protein; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.831
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.