STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLM29542.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (1248 aa)    
Predicted Functional Partners:
SLM29541.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.976
SLM29544.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.922
SLM29543.1
Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.917
SLM29548.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.865
SLM29552.1
Helicase domain protein (fragment).
 
   0.818
SLM29553.1
PglZ domain protein.
 
    0.802
SLM29554.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.797
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.790
SLM29545.1
ATP-binding region, ATPase-like protein.
 
     0.720
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
  0.716
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.