STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLM29715.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (299 aa)    
Predicted Functional Partners:
SLM27892.1
Fe-S cluster domain protein.
  
     0.735
ribBA
Riboflavin biosynthesis protein ribBA (Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.710
metH
MetH3.
  
     0.678
SLM29714.1
Ferredoxin (4Fe-4S iron-sulfur cluster binding protein).
 
     0.677
SLM28422.1
Putative Fe-S cluster; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.668
moeA-2
MoeA2; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
    
  0.636
SLM28174.1
MCP methyltransferase/methylesterase CheR/CheB with PAS/PAC sensor.
    
  0.616
SLM32262.1
Fe-S cluster domain protein.
  
     0.578
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
       0.576
cdhC
Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
     0.564
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.