STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftcdFormimidoyltransferase-cyclodeaminase (Includes: Glutamate formimidoyltransferase; Formimidoyltetrahydrofolate cyclodeaminase). (536 aa)    
Predicted Functional Partners:
SLM31777.1
Agmatinase; Belongs to the arginase family.
  
 
  0.965
rocF
Arginase; Belongs to the arginase family.
  
 
  0.965
hutI
Imidazolonepropionase.
 
 
  0.961
folD
Bifunctional protein FolD (Includes: Methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
   
 0.911
SLM28311.1
Putative Glycine hydroxymethyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.901
hutH
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
 
  
 0.899
SLM31471.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
 
 
 0.884
fhs
Formate--tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family.
    
 0.872
hutH-2
Histidine ammonia-lyase 2.
 
  
 0.869
SLM28261.1
Methionine synthase I, cobalamin-binding domain protein.
 
 
 0.855
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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