STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLM29998.1Putative glycosyl transferase (Group 2 family protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (256 aa)    
Predicted Functional Partners:
SLM30406.1
Undecaprenyl-phosphate glucose phosphotransferase.
 
 0.948
SLM29999.1
Putative GalE2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.857
rfbD
RfbD; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
 
 
 0.791
SLM29968.1
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.776
SLM29959.1
Hypothetical protein; No homology to any previously reported sequences.
  
     0.770
SLM29997.1
Glycosyltransferase.
 
    
0.688
SLM29957.1
ABC-2 type transporter.
 
  
 0.681
rmlC
dTDP-4-deoxyrhamnose-3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.676
capD
CapD2.
  
 
 0.670
SLM30001.1
WecA (fragment).
 
 
 0.617
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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