STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLM30162.1Putative Trimethylamine methyltransferase mttB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (477 aa)    
Predicted Functional Partners:
SLM29594.1
Pyrrolysine biosynthesis protein PylC.
  
     0.680
SLM27814.1
Putative hydantoinase/oxoprolinase fusion protein (Hydantoin converting enzyme); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.667
fdx-2
Fdx7.
 
     0.655
SLM31771.1
Hypothetical protein; No homology to any previously reported sequences.
 
     0.651
fdx
Fdx8.
 
     0.632
SLM32072.1
Sugar isomerase.
  
     0.622
mtbC-2
Cobalamin-dependent methionine synthase, B12-binding component; Function of strongly homologous gene; enzyme.
  
  0.620
SLM32456.1
ABC transporter related protein; Belongs to the ABC transporter superfamily.
  
  
  0.554
mtbC
Dimethylamine corrinoid protein 2.
  
  0.539
SLM32276.1
2,4-dienoyl-CoA reductase (NADPH).
    
  0.534
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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